Package: clusterLibreville
Title: Parallel and Deterministic Leiden Community Detection
Version: 0.99.0
Authors@R: person("Ben", "Carrillo", email = "ben.uzh@proton.me", role = c("aut", "cre"),
    comment = c(ORCID = "0009-0003-5704-4151"))
Description: A parallel and deterministic implementation of the Leiden
        community detection algorithm (Traag, Waltman and van Eck 2019,
        <doi:10.1038/s41598-019-41695-z>) for large sparse graphs such
        as single-cell kNN and SNN graphs, implemented in Rust. The
        same seed gives the same labels at any number of threads. The
        parallel design follows GVE-Leiden (Sahu et al. 2024,
        <doi:10.1145/3673038.3673146>). Works on sparse matrices,
        Seurat graphs and igraph graphs, and as a bluster clustering
        function.
License: MIT + file LICENSE
URL: https://github.com/btraven00/clust-libreville-rs
BugReports: https://github.com/btraven00/clust-libreville-rs/issues
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 8.0.0
Config/rextendr/version: 0.5.0
SystemRequirements: Cargo (Rust's package manager), rustc >= 1.85.0, xz
biocViews: Clustering, SingleCell, GraphAndNetwork, Network, Software
Depends: R (>= 4.6.0)
Imports: bluster, igraph, Matrix, methods, SingleCellExperiment, stats
Suggests: aricode, BiocStyle, ggplot2, knitr, patchwork, rmarkdown,
        scater, scran, scRNAseq, scuttle, Seurat, sparseMatrixStats,
        testthat (>= 3.0.0)
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/pak/sysreqs: libglpk-dev libxml2-dev xz-utils zlib1g-dev
        libclang-dev
Repository: https://btraven00.r-universe.dev
Date/Publication: 2026-10-20 23:16:35 UTC
RemoteUrl: https://github.com/btraven00/clust-libreville-rs
RemoteRef: r-pkg
RemoteSha: fbb535383670a743d0d355a6a80b38099f57fa5e
NeedsCompilation: yes
Packaged: 2026-10-21 00:56:11 UTC; root
Author: Ben Carrillo [aut, cre] (ORCID:
    <https://orcid.org/0009-0003-5704-4151>)
Maintainer: Ben Carrillo <ben.uzh@proton.me>